PyMOL is a molecular graphics system targetted at medium to large
biomolecules like proteins. It can generate high-quality
publication-ready molecular graphics images and animations.
- Visualization of molecules, molecular trajectories and surfaces
of crystallography data or orbitals
- Molecular builder and sculptor
- Internal raytracer and movie generator
- Fully extensible and scriptable via a python interface
File formats PyMOL can read include PDB, XYZ, CIF, MDL Molfile,
ChemDraw, CCP4 maps, XPLOR maps and Gaussian cube maps.