Package Info

htscodecs


C library for custom compression for CRAM and other formats


Productivity/Scientific/Other

htscodecs provides an API to access CRAM codecs used for "EXTERNAL" block types. These consist of two variants of the rANS codec (8-bit and 16-bit renormalisation, with run-length encoding and bit-packing also supported in the latter), a dynamic arithmetic coder, and custom codecs for name/ID compression and quality score compression derived from fqzcomp.


License: MIT
URL: https://github.com/samtools/htscodecs

Categories

Releases

Package Version Update ID Released Package Hub Version Platforms Subpackages
1.5.0-bp156.1.4 info GA Release 2023-12-07 15 SP6
  • AArch64
  • ppc64le
  • s390x
  • x86-64
  • htscodecs-devel
  • libhtscodecs2
  • libhtscodecs2-64bit
1.3.0-bp155.1.6 info GA Release 2023-05-17 15 SP5
  • AArch64
  • ppc64le
  • s390x
  • x86-64
  • htscodecs-devel
  • libhtscodecs2
  • libhtscodecs2-64bit