Package Info

bowtie2

install

Fast and memory-efficient short read aligner

Productivity/Scientific/Other
Bowtie 2 is an ultrafast and memory-efficient tool for aligning sequencing
reads to long reference sequences. It is particularly good at aligning
reads of about 50 up to 100s or 1,000s of characters, and particularly good
at aligning to relatively long (e.g. mammalian) genomes. Bowtie 2 indexes
the genome with an FM Index to keep its memory footprint small: for the
human genome, its memory footprint is typically around 3.2 GB. Bowtie 2
supports gapped, local, and paired-end alignment modes.
License: GPL-3.0-only
URL: http://bowtie-bio.sourceforge.net/bowtie2/index.shtml

Categories

Productivity Scientific Other

Releases

Package Version Update ID Released Package Hub Version Platforms Subpackages
2.5.1-bp155.1.15 info GA Release 2023-05-22 15 SP5
  • AArch64
  • s390x
  • x86-64
  • bowtie2
2.4.4-bp154.1.33 info GA Release 2022-05-09 15 SP4
  • AArch64
  • s390x
  • x86-64
  • bowtie2
2.3.5.1-bp153.1.12 info GA Release 2021-03-06 15 SP3
  • AArch64
  • x86-64
  • bowtie2
2.3.5.1-bp152.2.1 info GA Release 2020-05-18 15 SP2
  • AArch64
  • x86-64
  • bowtie2